Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAACATACATTAATGCCAGGC
.((((((((..((((((..(((&)))..)))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001371321
GeneSymbolC2orf50
Binding site2602,2623
Score0.846
Seed1
Au0.544
Energy-18.7
Binding len21
Me-7.861
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure