Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAGCTGCTGTGACAAG
(((..((.((((((((((((.&)))))))))))).))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001371321
GeneSymbolC2orf50
Binding site1097,1118
Score0.846
Seed0
Au0.544
Energy-23.3
Binding len21
Me-13.402
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings9
Pairings in 3prime end7
Position3UTR
2D Structure