Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GACCGCGCCGCTGCAC
.(((((((((((((.......&)))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001371340
GeneSymbolLIMS4
Binding site1568,1584
Score0.923
Seed1
Au0.338
Energy-20.1
Binding len16
Me-4.762
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end1
Position3UTR
2D Structure