Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTAGCCAAGGAGAAGGTGGGCACCGGAACGTGGCCGCAGCGCT
..((.(((((((((((..(((&.)))...)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001371365
GeneSymbolDUS4L-BCAP29
Binding site223,267
Score0.923
Seed0
Au0.412
Energy-21.2
Binding len23
Me-9.076
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure