Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGCGGCCGTGGTTCCGGAGCGGG
((((((((((((((((..(((&))).)))))))))))).....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001371408
GeneSymbolPROM1
Binding site3,29
Score0.846
Seed1
Au0.328
Energy-20.4
Binding len26
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings10
Pairings in 3prime end6
Position5UTR
2D Structure