Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTACATAGTATGCCAA
...((((((((.(((((.(...&).))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001371428
GeneSymbolCREB1
Binding site5546,5563
Score0.846
Seed0
Au0.706
Energy-18.2
Binding len17
Me-9.861
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure