Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCCTGCAGCCCTGCTGCAC
.((((((.(.(((((((.(((&)))...)))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001371438
GeneSymbolAGPAT1
Binding site1683,1705
Score0.923
Seed1
Au0.368
Energy-22.6
Binding len22
Me-7.349
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure