Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCGCCCGCTGAGAAGATCGTGAACAGTAATGGGGAGCTGTAC
.(((((((((((.((((((((&)))))))).))))..........................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001371494
GeneSymbolLIMS1
Binding site273,320
Score0.846
Seed1
Au0.456
Energy-21.3
Binding len47
Me-5.082
Phylopstem-0.00666018918918917
Phylopflank0.012582225000000016
Longest consecutive pairings8
Position of longest consecutive pairings39
Pairings in 3prime end8
PositionCDS
2D Structure