Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGAGGCTGAGGCAGGA
....(((((((((((((....&))))))))...))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001371495
GeneSymbolLIMS1
Binding site3511,3528
Score0.985
Seed0
Au0.353
Energy-22.4
Binding len17
Me-9.547
Phylopstem-0.016376500000000023
Phylopflank-0.060535487499999985
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end4
Position3UTR
2D Structure