Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCGCCCGCTGAGAAGATCGTGAACAGTAATGGGGAGCTGTAC
.(((((((((((.((((((((&)))))))).))))..........................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001371495
GeneSymbolLIMS1
Binding site175,222
Score0.923
Seed1
Au0.456
Energy-21.3
Binding len47
Me-5.082
Phylopstem5.007173027027027
Phylopflank4.2577318275
Longest consecutive pairings8
Position of longest consecutive pairings39
Pairings in 3prime end8
PositionCDS
2D Structure