Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGAGGCTGAGGCAGGA
....(((((((((((((....&))))))))...))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001371496
GeneSymbolLIMS1
Binding site3332,3349
Score0.985
Seed0
Au0.353
Energy-22.4
Binding len17
Me-9.547
Phylopstem0.166204625
Phylopflank0.05495765000000003
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end4
Position3UTR
2D Structure