Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCGCCCGCTGAGAAGATCGTGAACAGTAATGGGGAGCTGTAC
.(((((((((((.((((((((&)))))))).))))..........................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001371496
GeneSymbolLIMS1
Binding site188,235
Score0.923
Seed1
Au0.456
Energy-21.3
Binding len47
Me-5.082
Phylopstem6.074701243243242
Phylopflank4.9443638425
Longest consecutive pairings8
Position of longest consecutive pairings39
Pairings in 3prime end8
PositionCDS
2D Structure