Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTATTAGCACTGCAC
.(((((.(((....(((((((&)))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001371496
GeneSymbolLIMS1
Binding site4142,4160
Score0.846
Seed0
Au0.632
Energy-18.4
Binding len18
Me-13.655
Phylopstem-0.25997400000000004
Phylopflank0.19130443999999996
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure