Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTCCATAGTCCAAATGGACCAGGACCAGTCATTGTGGCCAGA
..(((((.(((((((.......&.)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001371497
GeneSymbolLIMS1
Binding site139,183
Score1.0
Seed0
Au0.5
Energy-16.7
Binding len14
Me-7.504
Phylopstem7.977732857142856
Phylopflank2.270027406249999
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end1
Position5UTR
2D Structure