Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTATTAGCACTGCAC
.(((((.(((....(((((((&)))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001371497
GeneSymbolLIMS1
Binding site4221,4239
Score0.923
Seed0
Au0.632
Energy-18.4
Binding len18
Me-13.655
Phylopstem0.4679792
Phylopflank1.0008888725
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure