Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGAGGCTGAGGCAGGA
....(((((((((((((....&))))))))...))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001371498
GeneSymbolLIMS1
Binding site3290,3307
Score0.985
Seed0
Au0.353
Energy-22.4
Binding len17
Me-9.547
Phylopstem-0.08006737500000002
Phylopflank-0.04185266875000003
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end4
Position3UTR
2D Structure