Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTATTAGCACTGCAC
.(((((.(((....(((((((&)))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001371498
GeneSymbolLIMS1
Binding site4100,4118
Score0.923
Seed0
Au0.632
Energy-18.4
Binding len18
Me-13.655
Phylopstem-0.5342757428571429
Phylopflank0.172841705
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure