Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAGCCAGAAGTCCCCGCAGGCCCGCGCCCTCTGCCGCAGCTGCT
..(((((((((((.....(((&.)))....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001371529
GeneSymbolFAM163B
Binding site402,450
Score0.846
Seed1
Au0.279
Energy-26.4
Binding len20
Me-6.782
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure