Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAACGGCGGCAGCAGCTGCAGT
((((((((((.(((((.....&.))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351226
GeneSymbolRIMBP2
Binding site441,466
Score0.846
Seed1
Au0.368
Energy-24.3
Binding len18
Me-6.762
Phylopstem0.63081184
Phylopflank0.29259652624999993
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure