Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTATATTCAAAAATTCTAGGACCAAAACCTCAGGTAAGCCAGGG
.((((((.(((((((((((...&))))))))..........................))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001371591
GeneSymbolMFSD8
Binding site1356,1401
Score0.846
Seed1
Au0.559
Energy-17.9
Binding len45
Me-6.107
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings37
Pairings in 3prime end5
PositionCDS
2D Structure