Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAACGGCGGCAGCAGCTGCAGT
((((((((((.(((((.....&.))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351232
GeneSymbolRIMBP2
Binding site479,504
Score0.923
Seed1
Au0.368
Energy-24.3
Binding len18
Me-6.762
Phylopstem-0.4100721
Phylopflank-0.15284058125
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure