Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTCAAGAGTACTCTCGTCAAGAGAATTCTGCAACTGCATGAACTTGTAACTACTCACTGCTGCAAT
(((((((((((((((((....&.))))))))))....................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001371610
GeneSymbolC9orf57
Binding site351,419
Score1.0
Seed1
Au0.574
Energy-22.0
Binding len39
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings28
Pairings in 3prime end4
PositionCDS
2D Structure