Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCGATGGTGCTGCAC
.((((((.((.(((((.((((&))))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001371741
GeneSymbolSFXN5
Binding site3352,3371
Score0.923
Seed1
Au0.338
Energy-21.9
Binding len19
Me-8.932
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end7
Position3UTR
2D Structure