Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATTTATGGAATATATGCCAGGG
.(((((((((...(((((((..&))))))).....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001371911
GeneSymbolMAP3K2
Binding site1587,1609
Score0.846
Seed1
Au0.676
Energy-17.3
Binding len22
Me-11.254
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure