Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCTGCAGCTGGAT
.(.(((((((((((.......&))))))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351261
GeneSymbolSMUG1
Binding site1033,1047
Score1.0
Seed0
Au0.544
Energy-19.5
Binding len14
Me-6.319
Phylopstem1.9761895454545453
Phylopflank1.3092464924999998
Longest consecutive pairings11
Position of longest consecutive pairings3
Pairings in 3prime end1
Position3UTR
2D Structure