Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGCACCTAGCTGTAGA
(((((((((.((.(((..(((&))).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330553
GeneSymbolAKAIN1
Binding site533,552
Score0.846
Seed1
Au0.5
Energy-18.7
Binding len19
Me-6.469
Phylopstem0.20368944444444445
Phylopflank-0.13920147374999986
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure