Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTGTGATGCAGCCCTCTGCCGGCAGGTGCAGCTGCT
..(((((((((.((((..(((&.))).)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351262
GeneSymbolSMUG1
Binding site712,750
Score0.923
Seed1
Au0.309
Energy-26.6
Binding len20
Me-8.304
Phylopstem2.9695823333333333
Phylopflank2.6292003200000003
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure