Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAATACCCCGGCTGTAAC
(((((((((.(((....((((&))))....))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351264
GeneSymbolC17orf80
Binding site3360,3382
Score0.923
Seed1
Au0.515
Energy-21.7
Binding len22
Me-7.005
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure