Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCGCAGCCCAGCTGGAC
.(.((((((.((((((.((((&)))).)))))))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001372044
GeneSymbolSHANK3
Binding site1055,1075
Score0.923
Seed0
Au0.368
Energy-25.3
Binding len20
Me-6.593
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings3
Pairings in 3prime end7
PositionCDS
2D Structure