Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCTGCTCCAGCGGCTGCAAG
((((((((((((..(((.(((&)))..))).)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001372044
GeneSymbolSHANK3
Binding site1791,1814
Score0.846
Seed1
Au0.353
Energy-22.6
Binding len23
Me-6.084
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure