Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTATATTTGTAGAAAGCATCAAGAACGGTATGCCAGT
..(((((((((((((((((...&))))))))....................))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001372052
GeneSymbolHP1BP3
Binding site2225,2263
Score0.846
Seed1
Au0.603
Energy-16.0
Binding len38
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure