Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAGGTTATGTACAACCAACTCTCAGAATTCAGACTTCCTGCAGCTGCC
..(((((((((((((((....&.))))))).......................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001372263
GeneSymbolSLC8A1
Binding site20417,20468
Score0.846
Seed1
Au0.618
Energy-21.8
Binding len40
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure