Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAACAACTGCAGGGCCTTGCTGTGAC
((((((((((((((((..(((&)))..))))))))).......))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001374256
GeneSymbolNPHP1
Binding site321,350
Score1.0
Seed1
Au0.559
Energy-21.4
Binding len29
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings15
Pairings in 3prime end6
PositionCDS
2D Structure