Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCACAGAGTATGCCAA
...((((((((..(((.(((((&))))))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001374263
GeneSymbolPPARG
Binding site1042,1061
Score0.923
Seed0
Au0.529
Energy-18.7
Binding len19
Me-11.15
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure