Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCGGTAGCTGCAAC
((((((((((.(....((((.&))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330420
GeneSymbolLUC7L
Binding site2165,2182
Score0.846
Seed1
Au0.485
Energy-19.7
Binding len17
Me-9.877
Phylopstem5.5630489
Phylopflank5.364321845
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure