Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCGGAGAGCTGCGGCTGG
...(((((((((((.(..(.(&).)..).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001374310
GeneSymbolSTXBP1
Binding site24,43
Score0.846
Seed0
Au0.191
Energy-19.9
Binding len19
Me-7.25
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure