Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCCGCAGCTGCAGC
(((((((((((((.((.....&)).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001374330
GeneSymbolTBL1XR1
Binding site716,733
Score0.923
Seed1
Au0.412
Energy-27.0
Binding len17
Me-4.794
Phylopstem6.318323307692307
Phylopflank5.76143540375
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure