Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGGGCCGCGGCCACATTGCAGT
((((((((((((((.(..(((&)))).))))))))).....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001374400
GeneSymbolRBPJ
Binding site1422,1447
Score0.923
Seed1
Au0.412
Energy-21.1
Binding len25
Me-4.673
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure