Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGAGCGACTCCAGCTGTT
..(((((((.((((((..(((&)))..)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351281
GeneSymbolMINDY4B
Binding site678,698
Score0.923
Seed1
Au0.559
Energy-21.2
Binding len20
Me-6.2
Phylopstem4.545960142857143
Phylopflank2.273717660000001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure