Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATTTTATGACCAGCAGCTGTC
..(((((((((((((((((((&))))))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001374484
GeneSymbolPIGV
Binding site3549,3570
Score1.0
Seed1
Au0.588
Energy-24.3
Binding len21
Me-4.957
Phylopstem0.599268355
Phylopflank0.09375888999999998
Longest consecutive pairings11
Position of longest consecutive pairings10
Pairings in 3prime end8
Position3UTR
2D Structure