Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTAACCTGGGGGCAGCAT
.(((.(((.((((((.((((.&)))))))))..).))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001374584
GeneSymbolPHACTR1
Binding site415,436
Score0.846
Seed0
Au0.515
Energy-16.7
Binding len21
Me-9.202
Phylopstem1.467844025
Phylopflank2.334761679
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end6
PositionCDS
2D Structure