Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGAGGCGCGGCTGCGGG
(((((((((((.(.....(((&)))..).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001374674
GeneSymbolHSF4
Binding site523,542
Score0.949
Seed1
Au0.324
Energy-21.2
Binding len19
Me-9.11
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure