Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGCACCGTGCTGTG
..(((((.(((((..(((((.&)))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001374693
GeneSymbolPOMT1
Binding site2563,2581
Score0.846
Seed0
Au0.412
Energy-20.4
Binding len18
Me-8.863
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure