Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCTAACTGCTGCAGG
(((((((...((((((((((.&)))))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001374693
GeneSymbolPOMT1
Binding site2361,2380
Score0.846
Seed1
Au0.412
Energy-20.1
Binding len19
Me-8.55
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure