Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCAGGAGGGGGCTCCCTGAAGCCAGTGG
(((((((((((((((((((...&)))))))))))..........)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001351293
GeneSymbolPNMA6E
Binding site2279,2309
Score0.846
Seed1
Au0.382
Energy-28.4
Binding len30
Me-3.938
Phylopstem-0.18294534482758618
Phylopflank-0.28104023875
Longest consecutive pairings11
Position of longest consecutive pairings19
Pairings in 3prime end5
Position3UTR
2D Structure