Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGTGCTACTGAGCTGCT
..((((((.((((.(((.(((&))).))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001375371
GeneSymbolSTAG2
Binding site1704,1723
Score0.846
Seed1
Au0.529
Energy-18.7
Binding len19
Me-6.87
Phylopstem4.33209
Phylopflank1.562865803125
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure