Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGTTTGCTGCCAGGGCTGCAAA
((((((((..(((.(((((.(&).))))).)))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330557
GeneSymbolEPB41L3
Binding site298,320
Score1.0
Seed1
Au0.515
Energy-21.1
Binding len22
Me-7.093
Phylopstem1.45381634875
Phylopflank1.2700099486249998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure