Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTTGCAACCGCAGTGGTTGCAT
.((((((((((((((((((..&))))))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001375567
GeneSymbolFOCAD
Binding site5095,5117
Score0.846
Seed1
Au0.456
Energy-25.9
Binding len22
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure