Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCGCTGCAGTTGCT
..(((((((((((.(..((((&))))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351303
GeneSymbolZDHHC11B
Binding site33,51
Score0.846
Seed1
Au0.25
Energy-22.2
Binding len18
Me-6.047
Phylopstem0.41818505454545457
Phylopflank0.030761239310344815
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure