Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AACCGTGGCTGCT
..((((((((((((.......&)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001375647
GeneSymbolIFI44L
Binding site51,64
Score1.0
Seed1
Au0.574
Energy-21.4
Binding len13
Me-5.925
Phylopstem2.375299666666667
Phylopflank1.724309335
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end1
Position5UTR
2D Structure